Marine Mammal Institute

Alexander AM, Steel DJ, Slikas B, Hoekzema K, Carraher C, Parks M, Cronn R, C. Baker S. Low Diversity in the Mitogenome of Sperm Whales Revealed by Next-Generation Sequencing. Genome Biology and Evolution [Internet]. 2013 ;5(1):113 - 129. http://gbe.oxfordjournals.org/content/5/1/113

Schmitt NT, Double MC, Jarman SN, Gales N, Marthick JR, Polanowski AM, C. Baker S, Steel DJ, K. Jenner CS, Jenner M-NM, et al. Low levels of genetic differentiation characterize Australian humpback whale ( Megaptera novaeangliae ) populations. Marine Mammal Science. 2014 ;30(1):221 - 241.

Schmitt NT, Double MC, C. Baker S, Steel DJ, Jenner KCS, Jenner MN, Paton D, Gales R, Jarman SN, Gales N, et al. Low levels of genetic differentiation characterize Australian humpback whale (Megaptera novaeangliae) populations. Panama City: International Whaling Commission; 2012. http://iwcoffice.org/sc64docs

Olavarría C, C. Baker S, Tezanos-Pinto G. Low mtDNA genetic diversity among killer whales around New Zealand. New Zealand Journal of Marine and Freshwater Research. 2014 ;48(1):147 - 153.

Hollatz C, Flach L, C. Baker S, Santos FR. Microsatellite data reveal fine genetic structure in male Guiana dolphins (Sotalia guianesis) in two geographically close embayments at south-eastern coast of Brazil. Marine Biology. 2011 ;158(4):927 - 933.

Pérez-Alvarez MJosé, Olavarría C, Moraga R, C. Baker S, Hamner RM, Poulin E. Microsatellite Markers Reveal Strong Genetic Structure in the Endemic Chilean Dolphin. PLOS ONE. 2015 ;10(4):e0123956.

Steel DJ, Anderson M, Garrigue C, Olavarria C, Caballero S, Childerhouse S, Clapham P, Constantine R, Dawson S, Donoghue M, et al. Migratory interchange of humpback whales (Megaptera novaeangliae) among breeding grounds of Oceania and connections to Antarctic feeding areas based on genotype matching. Polar Biology. 2018 ;41(4):653 - 662.

Patenaude NJ, Portway V, Schaeff C, Bannister J, Best PB, Payne R, Rowntree V, Rivarola M, C. Baker S. Mitochondrial DNA diversity and population structure among southern right whales (Eubalaena australis). Journal of Heredity. 2007 ;98:147-157.

Pimper LE, C. Baker S, R. Goodall NP, Olavarria C, Remis MI. Mitochondrial DNA variation and population structure of Commerson’s dolphins (Cephalorhynchus commersonii) in their southernmost distribution. Conservation Genetics. 2010 ;11(6):2157 - 2168.

C. Baker S, Cipriano F, Palumbi SR. Molecular genetic identification of whale and dolphin products from commercial markets in Korea and Japan. Molecular Ecology. 1996 ;5(5):671 - 685.

Caballero S, Jackson J, Mignucci-Giannoni AA, Barrios-Garrido H, Beltrán-Pedreros S, Montiel-Villalobos MAG, Robertson KM, C. Baker S. Molecular systematics of South American dolphins Sotalia: sister taxa determination and phylogenetic relationships, with insights into a multi-locus phylogeny of the Delphinidae. Molecular Phylogenetics and Evolution. 2008 ;46(1):252-68.

Garrigue C, Constantine R, Poole MM, Hauser N, Clapham P, Donoghue M, Russell K, Paton D, Mattila DK, Robbins J, et al. Movement of individual humpback whales between wintering grounds of Oceania (South Pacific), 1999 to 2004. Journal of Cetacean Research and Management. 2011 ;(Special Issue 3):275-82.

Jackson JA, Anderson M, Steel DJ, Brooks L, Baverstock P, Burns D, Clapham P, Constantine R, Franklin W, Franklin T, et al. Multistate measurements of genotype interchange between east Australia and Oceania (IWC breeding sub-stocks E1, E2, E3 and F) between 1999 and 2004. Panama City: International Whaling Commission; 2012. http://iwcoffice.org/sc64docs

Gabriele CM, Neilson JL, Straley JM, C. Baker S, Cedarleaf JA, Saracco JF. Natural history, population dynamics, and habitat use of humpback whales over 30 years on an Alaska feeding ground. Ecosphere [Internet]. 2017 ;8(1):e01641. http://doi.wiley.com/10.1002/ecs2.1641

Laikre L, Allendorf FW, Aroner LC, C. Baker S, Gregovich DP, Hansen MM, Jackson J, Kendall KC, McKelvey K, Neel MC, et al. Neglect of Genetic Diversity in Implementation of the Convention on Biological Diversity. Conservation Biology. 2010 ;24(1):86 - 88.

Madon B, Gimenez O, McArdle B, C. Baker S, Garrigue C. A new method for estimating animal abundance with two sources of data in capture-recapture studies. Methods in Ecology and Evolution. 2011 ;2(4):390 - 400.

Dalebout ML, Mead JG, C. Baker S, Baker AN, Helden AL. A New Species of Beaked Whale Mesoplodon perrini sp. n. (cetecea: ziphiidae) Discovered Through Phylogenetic Analyses of Mitochondrial DNA Sequences. Marine Mammal Science. 2002 ;18(3):577 - 608.

Hitchmough R, C. Baker S, Chilvers BL, Constantine R, DuFresne S, Mattlin R, van Helden A. New Zealand Threat Classification System: reply to Breen and Middleton. New Zealand Journal of Marine and Freshwater Research. 2013 ;47(4):599 - 602.

Hickey AJR, Lavery S, Hannan DA, C. Baker S, Clements KD. New Zealand triplefin fishes (family Tripterygiidae): contrasting population structure and mtDNA diversity within a marine species flock. Molecular Ecology. 2009 ;18(4):680-96.

Dalebout ML, C. Baker S, Steel DJ, Thompson K, Robertson KM, Chivers SJ, Perrin WF, Goonatilake M, Anderson RC, Mead JG, et al. A Newly Recognised Beaked Whale (Ziphiidae) in the Tropical Indo-Pacific: Mesoplodon hotaula or M. ginkgodens hotaula. Panama City: International Whaling Commission; 2012. http://iwcoffice.org/sc64docs

Thompson KF, Millar CD, C. Baker S, Dalebout M, Steel DJ, van Helden AL, Constantine R. A novel conservation approach provides insights into the management of rare cetaceans. Biological Conservation [Internet]. 2013 ;157:331 - 340. http://www.sciencedirect.com/science/article/pii/S0006320712003370

Van Cise AM, Baird RW, C. Baker S, Cerchio S, Claridge D, Fielding R, Hancock‐Hanser B, Marrero J, Martien KK, Mignucci‐Giannoni AA, et al. Oceanographic barriers, divergence, and admixture: Phylogeography and taxonomy of two putative subspecies of short‐finned pilot whale. Molecular Ecology. 2019 .

Garrigue C, Dodemont R, Steel DJ, C. Baker S. Organismal and 'gametic' capture-recapture using microsatellite genotyping confirm low abundance and reproductive autonomy of humpback whales on the wintering grounds of New Caledonia. Marine Ecology Progress Series. 2004 ;274:251-262.

Carroll E, Childerhouse S, CHRISTIE MARK, Lavery S, PATENAUDE NATHALIE, Alexander AM, Constantine R, Steel DJ, BOREN LAURA, C. Baker S. Paternity assignment and demographic closure in the New Zealand southern right whale. Molecular Ecology. 2012 ;21(16):3960 - 3973.

Carroll E, Childerhouse S, CHRISTIE MARK, Lavery S, PATENAUDE NATHALIE, Alexander AM, Constantine R, Steel DJ, BOREN LAURA, C. Baker S. Paternity assignment and demographic closure in the New Zealand southern right whale. Molecular Ecology. 2012 ;21(16):3960 - 3973.