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Thompson K, Baker CS, van Helden A, Patel S, Millar C, CONSTANTINE ROCHELLE.  2012.  The world’s rarest whale. Current Biology. 22(21):R905-R906.
Tezanos-Pinto G, Baker CS, Russell K, Martien KK, Baird RW, Hutt A, Stone GS, Mignucci-Giannoni AA, Caballero S, Endo T et al..  2009.  A worldwide perspective on the population structure and genetic diversity of bottlenose dolphins (Tursiops truncatus) in New Zealand. The Journal of Heredity. 100(1):11-24. Abstract
Oremus M, Gales R, Dalebout ML, Funahashi N, Endo T, Kage T, Steel DJ, Baker CS.  2009.  Worldwide mitochondrial DNA diversity and phylogeography of pilot whales (Globicephala spp.). Biological Journal of the Linnean Society. 98(4):729-744.
Rosenbaum H, Brownell RL, Brown MW, Schaeff C, Portway V, White BN, Malik S, Pastene LA, Patenaude NJ, Baker CS et al..  2000.  World-wide genetic differentiation of Eubalaena: questioning the number of right whale species. Molecular Ecology. 9(11):1793-1802.
Costello MJ, Baker CS.  2011.  Who eats sea meat? Expanding human consumption of marine mammals Biological Conservation. 144(12):2745-2746.
Baker CS, Palumbi SR.  1994.  Which Whales Are Hunted? A Molecular Genetic Approach to Monitoring Whaling Science. 265(5178):1538-1539.
Tallmon DA, Gregovich DP, Waples RS, Baker CS, Jackson J, Taylor BL, Archer E, Martien KK, Allendorf FW, Schwartz MK.  2010.  When are genetic methods useful for estimating contemporary abundance and detecting population trends? Molecular Ecology Resources. 10(4):684-692. Abstract
Mate B.  1989.  Watching habits and habitats from Earth satellites. Oceanus. 32:14-18.
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Willson MF, Womble JN.  2006.  Vertebrate exploitation of pulsed marine prey: a review and the example of spawning herring. Reviews in Fish Biology and Fisheries. 16:183-200.
Petrauskas L, Atkinson S.  2006.  Variation of fecal corticosterone concentrations in captive Steller sea lions (Eumetopias jubatus) in relation to season and behavior. Aquatic Mammals. 32:168-174.
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Meck S, Kastak D, Brill R.  2000.  Utilizing free contact techniques with an aggressive California sea lion (Zalophus californianus) to establish hearing thresholds in the open ocean environment. IMATA Soundings . 25:24-27.
Witteveen BH, Straley JM, Chenoweth E, Baker CS, Barlow J, Matkin C, Gabriele CM, Neilson J, Steel DJ, von Ziegesar O et al..  2011.  Using movements, genetics and trophic ecology to differentiate inshore from offshore aggregations of humpback whales in the Gulf of Alaska. Endangered Species Research. 14(3):217-225.
Blundell GM, Womble JN, Pendleton GW, Karpovich SA, Gende SM, Herreman JK.  2011.  Use of glacial ice and terrestrial habitats by harbor seals in Glacier Bay. Marine Ecology Progress Series.
Tiedemann R, Cipriano F, Morin PA, Hoelzel AR, Palsbøll P, Waples RS, Natoli L, Bachmann L, Postma L, Double MC et al..  2012.  Updated guidelines for DNA data quality control and error rate estimation, for genetic studies relevant to IWC management advice. Report to the Scientific Committee of the International Whaling Commission.
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Baker CS.  2008.  A truer measure of the market: the molecular ecology of fisheries and wildlife trade. Molecular Ecology. 17(18):3985-98. Abstract
Block BA, Jonsen ID, Jorgensen SJ, Winship AJ, Shaffer SA, Bograd SJ, Hazen EL, Foley DG, Breed GA, Harrison A-L et al..  2011.  Tracking apex marine predator movements in a dynamic ocean. Nature. 479:86-90.
Wintle NJP, Duffield DA, Barros NB, Jones RD, Rice JM.  2011.  Total mercury in stranded marine mammals from the Oregon and southern Washington coasts. Marine Mammal Science. 27(4):E268-E278. Abstract
Waite JN, Schrader WJ, Mellish JE, Horning M.  2007.  Three-dimensional photogrammetry as a tool for estimating morphometrics and body mass of Steller sea lions (Eumetopias jubatus). Canadian Journal of Fisheries & Aquatic Sciences. 64:296-303.
Cornick LA, Horning M.  2003.  A test of hypotheses based on optimal foraging considerations for a diving mammal using a novel experimental approach. Canadian Journal of Zoology. 81:1799-1807.
Mellish JE, Calkins DG, Christen DR, Horning M, Rea LD, Atkinson S.  2006.  Temporary captivity as a research tool: Comprehensive study of wild pinnipeds under controlled conditions. Aquatic Mammals. 32:58-65.
Womble JN, Sigler MF.  2006.  Temporal variation in Steller sea lion diet at a seasonal haulout in southeastern Alaska. Sea Lions of the World.
Mate B.  2008.  Technical instrumentation issues related to the design and execution of a controlled-exposure experiment for larger cetaceans to assess possible behavioural responses and potential impacts. Bioacoustics. 17(Special issue: International Conference on the Effects of Noise on Aquatic Life, Nyborg, Denmark, August 13-17, 2007):334-336.
Caballero S, Trujillo F, Vianna JA, Barrios-Garrido H, Montiel MG, Beltrán-Pedreros S, Marmontel M, Santos MC, Rossi M, Santo FR et al..  2007.  Taxonomic status of the genus Sotalia: species level ranking for “tucuxi” (Sotalia fluviatilis) and “costero” (Sotalia guianensis) dolphins. Marine Mammal Science. 23:358-386.
Peterson CH, Anderson SS, Cherr GN, Ambrose RF, Anghera S, Bay S, Blum M, Condon R, Dean TA, Graham M et al..  2012.  A Tale of Two Spills: Novel Science and Policy Implications of an Emerging New Oil Spill Model. BioScience. 62(5):461-469.
Scott MD, Wells RS, Irvine AB, Mate B.  1990.  Tagging and marking studies on small cetaceans. The Bottlenose Dolphin. :489-514.