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Hamner RM, Pichler FB, Heimeier D, CONSTANTINE ROCHELLE, Baker CS.  2012.  Genetic differentiation and limited gene flow among fragmented populations of New Zealand endemic Hector’s and Maui’s dolphins. Conservation Genetics. 13(4):987-1002.
Baker CS, Steel DJ, Choi Y, Lee H, Kim KS, Choi SK, Ma Y-un, Hambleton C, Psihoyos L, Brownell RL et al..  2010.  Genetic evidence of illegal trade in protected whales links Japan with the US and South Korea. Biology Letters. Abstract
Oremus M, Gales R, Kettles H, Baker CS.  2013.  Genetic Evidence of Multiple Matrilines and Spatial Disruption of Kinship Bonds in Mass Strandings of Long-finned Pilot Whales, Globicephala melas. Journal of Heredity.
Genome 10K Community of Scientists.  2009.  Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species. The Journal of Heredity. 100(6):659-74. Abstract
Herzing DL, Mate B.  1984.  Gray whale migrations along the Oregon coast, 1978-1981. The Gray Whale. :289-307.
Baker CS, Dalebout ML, Lento GM, Funahashi N.  2002.  Gray whale products sold in commercial markets along the Pacific coast of Japan. Marine Mammal Science. 18(1):295-300.
Urbán-Ramirez J, de Sahagún FV, Jones ML, Swartz SL, Mate B, Gómez-Gallardo A, Guerrero-Ruíz M.  2004.  Gray whales with loss of flukes adapt and survive. Marine Mammal Science. 20:335-338.
Jackson JA, Laikre L, Baker CS, Kendall KC.  2012.  Guidelines for collecting and maintaining archives for genetic monitoring. Conservation Genetics Resources. 4(2):527-536.