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Journal Article
Baker CS, Cooke J, Lavery S, Dalebout ML, Ma Y-un, Funahashi N, Carraher C, Brownell, Jr. RL.  2007.  Estimating the number of whales entering trade using DNA profiling and capture-recapture analysis of market products. Molecular Ecology. 13:2617-2626.
Baker CS, Steel DJ, Choi Y, Lee H, Kim KS, Choi SK, Ma Y-un, Hambleton C, Psihoyos L, Brownell RL et al..  2010.  Genetic evidence of illegal trade in protected whales links Japan with the US and South Korea. Biology Letters. Abstract
Baker CS, Dalebout ML, Lento GM, Funahashi N.  2002.  Gray whale products sold in commercial markets along the Pacific coast of Japan. Marine Mammal Science. 18(1):295-300.
Baker CS, Lukoschek V, Lavery S, Dalebout ML, Ma Y-un, Endo T, Funahashi N.  2006.  Incomplete reporting of whale, dolphin and porpoise ‘bycatch' revealed by molecular monitoring of Korean markets. Animal Conservation. 9:474-482.
Endo T, Hotta Y, Hisamichi Y, Kimura O, Sato R, Haraguchi K, Funahashi N, Baker CS.  2012.  Stable isotope ratios and mercury levels in red meat products from baleen whales sold in Japanese markets. Ecotoxicology and Environmental Safety. 79:35-41.
Endo T, Hisamichi Y, Kimura O, Haraguchi K, Lavery S, Dalebout ML, Funahashi N, Baker CS.  2010.  Stable isotope ratios of carbon and nitrogen and mercury concentrations in 13 toothed whale species taken from the western Pacific Ocean off Japan. Environmental Science & Technology. 44(7):2675-81. Abstract
Oremus M, Gales R, Dalebout ML, Funahashi N, Endo T, Kage T, Steel DJ, Baker CS.  2009.  Worldwide mitochondrial DNA diversity and phylogeography of pilot whales (Globicephala spp.). Biological Journal of the Linnean Society. 98(4):729-744.